TopCorr

Published:

TopCorr is a small Python library designed for the construction of filtered correlation matrices. It can be found on Github: here

It can be installed using pip:

pip install topcorr

You’ll need numpy and networkx for it to work.

Methods Implemented

  • MST
  • PMFG
  • TMFG
  • Thresholding
  • Dependency Network
  • k-Nearest Neighbours Network
  • Partial Correlation
  • Affinity Matrix
  • Average Linkage MST
  • Forest of MSTs
  • Detrended Cross Correlation Analysis